[OpenAFS-devel] Re: 1.3.74: cache still having problems?

Martin MOKREJŠ mmokrejs@ribosome.natur.cuni.cz
Mon, 13 Dec 2004 13:27:06 +0100


Hi,
  I have the same problem with 1.3.75.

--12:46:52--  ftp://ftp.embl-heidelberg.de/pub/databases/trembl/trembl
           => `trembl'
==> CWD not required.
==> PORT ... done.    ==> RETR trembl ... done.
trembl: No such file or directory
--12:46:52--  ftp://ftp.embl-heidelberg.de/pub/databases/trembl/trembl.dat
           => `trembl.dat'
Connecting to ftp.embl-heidelberg.de[192.54.41.18]:21... connected.
Logging in as anonymous ... Logged in!
==> SYST ... 
Server error, can't determine system type.
==> PWD ... done.
==> TYPE I ... done.  ==> CWD /pub/databases/trembl ... done.
==> PORT ... done.    ==> RETR trembl.dat ... done.
Length: 513,982,006

100%[===============================================================================>] 2,147,333,016    1.71M/s    ETA 00:00wget: progress.c:704: create_image: Assertion `insz <= dlsz' failed.

oxygen trembl #  wget --version
GNU Wget 1.9

Copyright (C) 2003 Free Software Foundation, Inc.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
GNU General Public License for more details.

Originally written by Hrvoje Niksic <hniksic@xemacs.org>.
oxygen trembl # ls -la /afs/.biomed.cas.cz/
databases     i386_linux24  
oxygen trembl # ls -la /afs/.biomed.cas.cz/databases/
TrEMBL         embl           genomes        pir_databases  trembl         
UniGene        genbank        indexed        rozbalit.txt   update.sh      
oxygen trembl # ls -la /afs/.biomed.cas.cz/databases/trembl/
ls: /afs/.biomed.cas.cz/databases/trembl/trembl: Network dropped connection on reset
-------------------------------------------------^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
total 2097385
drwxr-xr-x   2 daemon root       2048 Dec 13 12:46 .
drwxrwxrwx  10 root   root       2048 Dec  9 16:04 ..
-rw-r--r--   0 daemon root       4096 Nov 16 12:47 .update.sh.swp
-rw-rw-r--   1 daemon root        835 Feb 18  2000 README
lrwxr-xr-x   1 daemon root          6 Nov  5 17:16 this_is_not_remtrembl -> README
lrwxr-xr-x   1 daemon root          6 Nov  5 17:16 this_is_not_sptrembl -> README
-rw-r--r--   1 daemon root 2147709216 Dec 13 13:07 trembl.dat
-rwxr-xr-x   1 daemon root         76 Nov 16 12:47 update.sh

After few minutes, I get:

$ ls -la /afs/.biomed.cas.cz/databases/trembl/
ls: /afs/.biomed.cas.cz/databases/trembl/.update.sh.swp: No such file or directory
ls: /afs/.biomed.cas.cz/databases/trembl/trembl: Network dropped connection on reset
total 2097381
drwxr-xr-x   2 daemon root       2048 Dec 13 12:46 .
drwxrwxrwx  10 root   root       2048 Dec  9 16:04 ..
-rw-rw-r--   1 daemon root        835 Feb 18  2000 README
lrwxr-xr-x   1 daemon root          6 Nov  5 17:16 this_is_not_remtrembl -> README
lrwxr-xr-x   1 daemon root          6 Nov  5 17:16 this_is_not_sptrembl -> README
-rw-r--r--   1 daemon root 2147709216 Dec 13 13:07 trembl.dat
-rwxr-xr-x   1 daemon root         76 Nov 16 12:47 update.sh


  To repeat, do yourself:
$ wget -r -l inf -nH -nd -N ftp://ftp.embl-heidelberg.de/pub/databases/trembl
on linux 2.4.28-rc1, smp kernel with highmem support. The "Assertion"
is a bug in wget, which seems not to be fixed any time soon. :(
http://lkml.org/lkml/2004/6/30/284

Martin

Martin MOKREJŠ wrote:
> Hi,
>  I have found some files in a directory where they shouldn't be.
> The machine is SMP linux running 2.4.28-rc1, afs is compiled
> with full debug and "-O0 -ggdb". If tells me which commands I should 
> exectute,
> I'd contribute with some more debug info.
> Thanks!
> Martin
> 
> oxygen bin # ls -la /afs/.biomed.cas.cz/databases/trembl/
> ls: /afs/.biomed.cas.cz/databases/trembl/trembl.dat: Network dropped 
> connection on reset
> total 1324532
> drwxr-xr-x   2 daemon root       2048 Dec  9 18:31 .
> drwxrwxrwx  10 root   root       2048 Dec  9 16:04 ..
> -rw-r--r--   1 daemon root       4096 Nov 16 12:47 .update.sh.swp
> -rw-rw-r--   1 daemon root        835 Feb 18  2000 README
> lrwxr-xr-x   1 daemon root          6 Nov  5 17:16 this_is_not_remtrembl 
> -> README
> lrwxr-xr-x   1 daemon root          6 Nov  5 17:16 this_is_not_sptrembl 
> -> README
> -rw-rw-r--   1 daemon root 1356307955 Dec  5 04:33 trembl
> -rwxr-xr-x   1 daemon root         76 Nov 16 12:47 update.sh
> oxygen bin #
> oxygen bin # ls -la /afs/.biomed.cas.cz/i386_linux24/bio/bin
> ls: /afs/.biomed.cas.cz/i386_linux24/bio/bin/update.sh: Host is down
> ls: /afs/.biomed.cas.cz/i386_linux24/bio/bin/README: Network dropped 
> connection on reset
> ls: /afs/.biomed.cas.cz/i386_linux24/bio/bin/this_is_not_remtrembl: 
> Network dropped connection on reset
> ls: /afs/.biomed.cas.cz/i386_linux24/bio/bin/this_is_not_sptrembl: 
> Network dropped connection on reset
> ls: /afs/.biomed.cas.cz/i386_linux24/bio/bin/.update.sh.swp: Network 
> dropped connection on reset
> ls: /afs/.biomed.cas.cz/i386_linux24/bio/bin/trembl: Host is down
> total 4
> drwxr-xr-x  2 daemon root 2048 Dec  9 01:18 .
> drwxrwxrwx  8 root   root 2048 Dec 10 14:29 ..
> oxygen bin # oxygen bin # ls -la /afs/biomed.cas.cz/i386_linux24/bio/bin
> ls: /afs/biomed.cas.cz/i386_linux24/bio/bin/update.sh: Host is down
> ls: /afs/biomed.cas.cz/i386_linux24/bio/bin/README: Network dropped 
> connection on reset
> ls: /afs/biomed.cas.cz/i386_linux24/bio/bin/this_is_not_remtrembl: 
> Network dropped connection on reset
> ls: /afs/biomed.cas.cz/i386_linux24/bio/bin/this_is_not_sptrembl: 
> Network dropped connection on reset
> ls: /afs/biomed.cas.cz/i386_linux24/bio/bin/.update.sh.swp: Network 
> dropped connection on reset
> ls: /afs/biomed.cas.cz/i386_linux24/bio/bin/trembl: Host is down
> total 4
> drwxr-xr-x  2 daemon root 2048 Dec  9 01:18 .
> drwxrwxrwx  8 root   root 2048 Dec 10 14:29 ..
> oxygen bin # vos release root.cell
> Released volume root.cell successfully
> oxygen bin # ls -la /afs/biomed.cas.cz/i386_linux24/bio/bin
> ls: /afs/biomed.cas.cz/i386_linux24/bio/bin/update.sh: Host is down
> ls: /afs/biomed.cas.cz/i386_linux24/bio/bin/README: Network dropped 
> connection on reset
> ls: /afs/biomed.cas.cz/i386_linux24/bio/bin/this_is_not_remtrembl: 
> Network dropped connection on reset
> ls: /afs/biomed.cas.cz/i386_linux24/bio/bin/this_is_not_sptrembl: 
> Network dropped connection on reset
> ls: /afs/biomed.cas.cz/i386_linux24/bio/bin/.update.sh.swp: Network 
> dropped connection on reset
> ls: /afs/biomed.cas.cz/i386_linux24/bio/bin/trembl: Host is down
> total 4
> drwxr-xr-x  2 daemon root 2048 Dec  9 01:18 .
> drwxrwxrwx  8 root   root 2048 Dec 10 14:29 ..
> oxygen bin #
> oxygen bin # bos status -server oxygen -long
> Instance ptserver, (type is simple) currently running normally.
>    Process last started at Thu Dec  9 01:06:10 2004 (1 proc starts)
>    Command 1 is '/usr/afs/bin/ptserver'
> 
> Instance vlserver, (type is simple) currently running normally.
>    Process last started at Thu Dec  9 01:06:10 2004 (1 proc starts)
>    Command 1 is '/usr/afs/bin/vlserver'
> 
> Instance fs, (type is fs) currently running normally.
>    Auxiliary status is: file server running.
>    Process last started at Thu Dec  9 01:06:10 2004 (3 proc starts)
>    Last exit at Thu Dec  9 01:06:10 2004
>    Command 1 is '/usr/afs/bin/fileserver'
>    Command 2 is '/usr/afs/bin/volserver'
>    Command 3 is '/usr/afs/bin/salvager'
> 
> oxygen bin #